RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06280.4 View Network Show in Genome Browser |
| Other Names | Os08g0159500 |
| Description | LSD1 zinc finger domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3460710-3463786 Nucleotide Length: 432 |
| Protein-coding | LOC_Os08g06280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g57149 LOC_Os05g31280 LOC_Os01g59060 LOC_Os02g30420 LOC_Os02g55380 LOC_Os03g08790 |
| Reference | |
|---|---|
| PubMed | 15915636 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06280.4 |
| Rice Genome Annotation | LOC_Os08g06280.4 |
| Ricechip | LOC_Os08g06280.4 |
| KEGG | osa:4344713 dosa:Os08t0159500-01 |
| Entrez-Gene | 4344713 |