RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06330.1 View Network Show in Genome Browser |
| Other Names | Os08g0159800 |
| Description | zinc finger C-x8-C-x5-C-x3-H type family protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3508751-3512007 Nucleotide Length: 1104 |
| Protein-coding | LOC_Os08g06330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g49080 LOC_Os04g57600 LOC_Os01g61830 LOC_Os01g09620 LOC_Os01g42970 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06330.1 |
| Rice Genome Annotation | LOC_Os08g06330.1 |
| Ricechip | LOC_Os08g06330.1 |
| KEGG | osa:4344715 dosa:Os08t0159800-00 |
| Entrez-Gene | 4344715 |