RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06344.3 View Network Show in Genome Browser |
| Other Names | Os08g0159900 |
| Description | transposon protein, putative, CACTA, En/Spm sub-class, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3513920-3518732 Nucleotide Length: 3150 |
| Protein-coding | LOC_Os08g06344 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15700 LOC_Os02g58090 LOC_Os02g14780 LOC_Os03g50850 LOC_Os05g05780 LOC_Os01g49680 LOC_Os02g43760 LOC_Os01g27040 LOC_Os05g26890 LOC_Os01g15860 LOC_Os05g46560 More.. |
| Downstream Genes | LOC_Os10g35550 LOC_Os09g07500 LOC_Os11g42420 LOC_Os08g43640 LOC_Os10g25010 LOC_Os09g37000 LOC_Os10g27190 LOC_Os08g14220 LOC_Os12g07720 LOC_Os11g08660 LOC_Os11g07500 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 osa-miR5152-5p osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06344.3 |
| Rice Genome Annotation | LOC_Os08g06344.3 |
| Ricechip | LOC_Os08g06344.3 |
| KEGG | osa:4344716 dosa:Os08t0159900-01 |
| Entrez-Gene | 4344716 |