RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06380.2 View Network Show in Genome Browser |
| Other Names | Os08g0160500 |
| Description | CSLF6 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3544163-3548141 Nucleotide Length: 2559 |
| Protein-coding | LOC_Os08g06380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g14850 LOC_Os05g08370 LOC_Os04g42620 LOC_Os01g59150 LOC_Os03g45920 LOC_Os06g34120 LOC_Os06g03640 LOC_Os02g52500 LOC_Os04g32030 LOC_Os07g38490 LOC_Os03g55070 More.. |
| Downstream Genes | LOC_Os09g35630 LOC_Os08g23180 LOC_Os08g35710 LOC_Os12g42230 LOC_Os09g07350 |
| Reference | |
|---|---|
| PubMed | 22388489 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06380.2 |
| Rice Genome Annotation | LOC_Os08g06380.2 |
| Ricechip | LOC_Os08g06380.2 |
| KEGG | osa:4344719 dosa:Os08t0160500-01 |
| Entrez-Gene | 4344719 |