RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06470.1 View Network Show in Genome Browser |
| Other Names | Os08g0162000 |
| Description | transmembrane 9 superfamily member, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3630958-3635519 Nucleotide Length: 921 |
| Protein-coding | LOC_Os08g06470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68710 LOC_Os05g48020 LOC_Os01g74640 LOC_Os02g58730 LOC_Os05g38630 LOC_Os05g24601 LOC_Os07g14540 LOC_Os05g06280 LOC_Os03g52780 LOC_Os06g37160 LOC_Os03g14020 More.. |
| Downstream Genes | LOC_Os09g36670 LOC_Os11g37480 LOC_Os11g07280 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06470.1 |
| Rice Genome Annotation | LOC_Os08g06470.1 |
| Ricechip | LOC_Os08g06470.1 |
| KEGG | osa:9272473 dosa:Os08t0162000-01 |
| Entrez-Gene | 9272473 |