RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06500.1 View Network Show in Genome Browser |
| Other Names | Os08g0162300,Os08g0162250 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3680925-3688728 Nucleotide Length: 1902 |
| Protein-coding | LOC_Os08g06500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g37060 LOC_Os02g32030 LOC_Os06g46770 LOC_Os02g06640 LOC_Os04g38410 LOC_Os04g02820 LOC_Os05g48630 LOC_Os02g49870 LOC_Os03g03720 LOC_Os07g37240 LOC_Os04g40950 More.. |
| Downstream Genes | LOC_Os08g06510 LOC_Os11g26850 LOC_Os12g08770 LOC_Os09g30340 LOC_Os12g05430 LOC_Os11g47760 LOC_Os11g43900 LOC_Os08g35760 LOC_Os12g23180 LOC_Os10g32920 LOC_Os11g11390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06500.1 |
| Rice Genome Annotation | LOC_Os08g06500.1 |
| Ricechip | LOC_Os08g06500.1 |
| KEGG | osa:4344730 dosa:Os08t0162300-01dosa:Os08t0162250-00 |
| Entrez-Gene | 4344730 |