RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06530.1 View Network Show in Genome Browser |
| Other Names | Os08g0162600 |
| Description | rubredoxin family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3694282-3696648 Nucleotide Length: 783 |
| Protein-coding | LOC_Os08g06530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g38230 LOC_Os05g49380 LOC_Os06g21380 LOC_Os02g57060 LOC_Os01g47450 LOC_Os01g46590 LOC_Os05g34240 LOC_Os05g22730 LOC_Os03g61090 LOC_Os01g51410 LOC_Os04g55230 More.. |
| Downstream Genes | LOC_Os08g23410 LOC_Os09g25310 LOC_Os11g14170 LOC_Os08g44320 LOC_Os12g28770 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06530.1 |
| Rice Genome Annotation | LOC_Os08g06530.1 |
| Ricechip | LOC_Os08g06530.1 |
| KEGG | osa:4344733 dosa:Os08t0162600-01 |
| Entrez-Gene | 4344733 |