RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06600.1 View Network Show in Genome Browser |
| Other Names | Os08g0163100 |
| Description | nuf2 family protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3722365-3726246 Nucleotide Length: 1413 |
| Protein-coding | LOC_Os08g06600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03540 LOC_Os04g42600 LOC_Os02g02410 LOC_Os02g03890 LOC_Os02g30840 LOC_Os01g66560 LOC_Os07g37650 LOC_Os02g12850 LOC_Os05g48960 LOC_Os03g16920 LOC_Os01g39250 More.. |
| Downstream Genes | LOC_Os08g22354 LOC_Os09g02700 LOC_Os12g08280 LOC_Os10g41960 LOC_Os12g07950 LOC_Os08g42910 LOC_Os12g08270 LOC_Os12g35560 LOC_Os12g32240 LOC_Os09g39270 LOC_Os12g38000 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06600.1 |
| Rice Genome Annotation | LOC_Os08g06600.1 |
| Ricechip | LOC_Os08g06600.1 |
| KEGG | osa:4344736 dosa:Os08t0163100-01 |
| Entrez-Gene | 4344736 |