RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g07060.1 View Network Show in Genome Browser |
| Other Names | Os08g0167500 |
| Description | CRR6, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3949017-3951136 Nucleotide Length: 762 |
| Protein-coding | LOC_Os08g07060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g64350 LOC_Os05g33520 LOC_Os01g54020 LOC_Os02g15900 LOC_Os01g59080 LOC_Os02g30380 LOC_Os02g22260 LOC_Os03g08570 LOC_Os05g01750 LOC_Os02g49326 LOC_Os02g18450 More.. |
| Downstream Genes | LOC_Os09g02214 LOC_Os10g10170 LOC_Os09g39180 LOC_Os11g44810 |
| Reference | |
|---|---|
| PubMed | 21848656 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g07060.1 |
| Rice Genome Annotation | LOC_Os08g07060.1 |
| Ricechip | LOC_Os08g07060.1 |
| KEGG | osa:4344752 dosa:Os08t0167500-01 |
| Entrez-Gene | 4344752 |