RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os08g07400.1 View Network Show in Genome Browser
Other Names	Os08g0170900
Description	cullin, putative, expressed
Gene Attributes	Chromosome: Chr8 CDS Coordinates (5'-3'): 4153343-4157251 Nucleotide Length: 2196
Protein-coding	LOC_Os08g07400

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0007049	cell cycle	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os04g40830 LOC_Os03g48140 LOC_Os01g49000 LOC_Os02g47870 LOC_Os06g29350 LOC_Os03g53660 LOC_Os06g21330 LOC_Os01g27160 LOC_Os02g57190 LOC_Os03g64290 LOC_Os06g12690 More..
Downstream Genes	LOC_Os11g26910 LOC_Os09g36830 LOC_Os10g30190 LOC_Os08g28820 LOC_Os09g10200 LOC_Os08g28800 LOC_Os09g10260 LOC_Os09g10270

miRNA Regulations
miRNAs	osa-miR2929

Database Links
Gramene	LOC_Os08g07400.1
Rice Genome Annotation	LOC_Os08g07400.1
Ricechip	LOC_Os08g07400.1
KEGG	osa:4344771 dosa:Os08t0170900-01
Entrez-Gene	4344771