RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g08000.1 View Network Show in Genome Browser |
| Other Names | Os08g0177300 |
| Description | DNA binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 4523651-4532056 Nucleotide Length: 2526 |
| Protein-coding | LOC_Os08g08000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g40580 LOC_Os04g52130 LOC_Os01g09460 LOC_Os03g55150 LOC_Os07g02210 LOC_Os03g63940 LOC_Os07g06980 LOC_Os02g49190 LOC_Os05g05230 LOC_Os06g38470 LOC_Os07g01820 More.. |
| Downstream Genes | LOC_Os12g37860 LOC_Os11g43640 LOC_Os12g32240 LOC_Os11g42160 LOC_Os10g42950 LOC_Os10g41150 LOC_Os09g02284 LOC_Os09g32680 LOC_Os10g34540 LOC_Os08g39080 LOC_Os09g09480 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR444a-3p.2 osa-miR444d.2 osa-miR444e |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g08000.1 |
| Rice Genome Annotation | LOC_Os08g08000.1 |
| Ricechip | LOC_Os08g08000.1 |
| KEGG | osa:4344801 dosa:Os08t0177300-01 |
| Entrez-Gene | 4344801 |