RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g08080.2 View Network Show in Genome Browser |
| Other Names | Os08g0178300 |
| Description | BUD13, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 4586483-4591233 Nucleotide Length: 1326 |
| Protein-coding | LOC_Os08g08080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g28090 LOC_Os03g61110 LOC_Os02g58090 LOC_Os03g15700 LOC_Os04g01970 LOC_Os05g22260 LOC_Os01g46980 LOC_Os06g33250 LOC_Os01g43030 LOC_Os03g10780 LOC_Os02g14780 More.. |
| Downstream Genes | LOC_Os10g18150 LOC_Os08g36490 LOC_Os08g39880 LOC_Os10g31900 LOC_Os08g08220 LOC_Os08g09320 LOC_Os11g07480 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g08080.2 |
| Rice Genome Annotation | LOC_Os08g08080.2 |
| Ricechip | LOC_Os08g08080.2 |
| KEGG | osa:4344809 dosa:Os08t0178300-01 |
| Entrez-Gene | 4344809 |