RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g08830.1 View Network Show in Genome Browser |
| Other Names | Os08g0187700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 5118735-5128134 Nucleotide Length: 2916 |
| Protein-coding | LOC_Os08g08830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g46180 LOC_Os03g24339 LOC_Os01g13160 LOC_Os04g54420 LOC_Os02g08360 LOC_Os02g46962 LOC_Os06g22650 LOC_Os05g27320 LOC_Os08g01740 LOC_Os02g19170 LOC_Os06g07000 More.. |
| Downstream Genes | LOC_Os11g09329 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g08830.1 |
| Rice Genome Annotation | LOC_Os08g08830.1 |
| Ricechip | LOC_Os08g08830.1 |
| KEGG | osa:4344833 dosa:Os08t0187700-01 |
| Entrez-Gene | 4344833 |