RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g09220.1 View Network Show in Genome Browser |
| Other Names | Os08g0191300 |
| Description | OsFBX262 - F-box domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 5345885-5347221 Nucleotide Length: 960 |
| Protein-coding | LOC_Os08g09220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g38730 LOC_Os03g46600 LOC_Os06g38930 LOC_Os06g38670 LOC_Os02g11980 LOC_Os02g01800 LOC_Os06g38650 LOC_Os06g38590 LOC_Os06g38780 LOC_Os02g11930 LOC_Os02g12030 More.. |
| Downstream Genes | LOC_Os10g33060 LOC_Os11g41100 LOC_Os11g36090 LOC_Os11g36150 LOC_Os11g36140 LOC_Os12g42520 LOC_Os11g36160 LOC_Os11g36180 LOC_Os11g07100 LOC_Os11g29790 LOC_Os10g19160 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1861n |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g09220.1 |
| Rice Genome Annotation | LOC_Os08g09220.1 |
| Ricechip | LOC_Os08g09220.1 |
| KEGG | dosa:Os08t0191300-00 |