RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g09250.3 View Network Show in Genome Browser |
| Other Names | Os08g0191700 |
| Description | glyoxalase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 5373362-5377152 Nucleotide Length: 546 |
| Protein-coding | LOC_Os08g09250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g46360 LOC_Os05g07940 LOC_Os03g45720 LOC_Os03g16940 LOC_Os07g06660 LOC_Os02g07160 LOC_Os02g47850 LOC_Os03g39830 LOC_Os08g03290 LOC_Os03g63420 LOC_Os01g34620 More.. |
| Downstream Genes | LOC_Os08g34270 LOC_Os09g32976 LOC_Os08g23710 LOC_Os12g07650 LOC_Os10g35720 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1425-3p osa-miR1861a osa-miR1861c osa-miR1861o |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g09250.3 |
| Rice Genome Annotation | LOC_Os08g09250.3 |
| Ricechip | LOC_Os08g09250.3 |
| KEGG | osa:4344858 dosa:Os08t0191700-01 |
| Entrez-Gene | 4344858 |