RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g10350.1 View Network Show in Genome Browser |
| Other Names | Os08g0203900 |
| Description | integral membrane family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 6062772-6065393 Nucleotide Length: 1029 |
| Protein-coding | LOC_Os08g10350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71400 LOC_Os02g10510 LOC_Os01g71340 LOC_Os01g14100 LOC_Os03g58580 LOC_Os05g47770 LOC_Os01g71650 LOC_Os02g38230 LOC_Os01g71350 LOC_Os03g30790 LOC_Os02g36940 More.. |
| Downstream Genes | LOC_Os10g02970 LOC_Os10g38930 LOC_Os08g33370 LOC_Os08g29520 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846a-5p osa-miR1846b-5p osa-miR1846c-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g10350.1 |
| Rice Genome Annotation | LOC_Os08g10350.1 |
| Ricechip | LOC_Os08g10350.1 |
| KEGG | osa:4344918 dosa:Os08t0203900-01 |
| Entrez-Gene | 4344918 |