RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g10649.1 View Network Show in Genome Browser |
| Other Names | Os08g0207600 |
| Description | GTPase of unknown function domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 6272214-6280922 Nucleotide Length: 1314 |
| Protein-coding | LOC_Os08g10649 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g18850 LOC_Os04g43050 LOC_Os01g68120 LOC_Os06g25250 LOC_Os03g02970 LOC_Os03g38740 LOC_Os03g55640 LOC_Os05g24160 LOC_Os02g16709 LOC_Os01g37050 LOC_Os06g05250 More.. |
| Downstream Genes | LOC_Os10g34430 LOC_Os09g14610 LOC_Os09g28000 LOC_Os09g33460 LOC_Os12g01916 LOC_Os11g01869 LOC_Os11g41910 LOC_Os11g26030 LOC_Os12g42370 LOC_Os11g40500 LOC_Os12g09570 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g10649.1 |
| Rice Genome Annotation | LOC_Os08g10649.1 |
| Ricechip | LOC_Os08g10649.1 |
| KEGG | osa:4344938 dosa:Os08t0207600-01 |
| Entrez-Gene | 4344938 |