RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g12410.1 View Network Show in Genome Browser |
| Other Names | Os08g0220400 |
| Description | pectinesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 7325121-7327754 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os08g12410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11600 LOC_Os04g58840 LOC_Os01g61610 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2867-5p osa-miR5160 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g12410.1 |
| Rice Genome Annotation | LOC_Os08g12410.1 |
| Ricechip | LOC_Os08g12410.1 |
| KEGG | osa:4344960 dosa:Os08t0220400-01 |
| Entrez-Gene | 4344960 |