RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g12430.1 View Network Show in Genome Browser |
| Other Names | Os08g0220600 |
| Description | VERNALIZATION-INSENSITIVE, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 7338826-7348077 Nucleotide Length: 1893 |
| Protein-coding | LOC_Os08g12430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42320 LOC_Os06g01450 LOC_Os05g38810 LOC_Os01g64560 LOC_Os02g40000 LOC_Os07g47500 LOC_Os04g25550 |
| Downstream Genes | LOC_Os12g06800 LOC_Os09g21360 LOC_Os08g13630 LOC_Os11g38900 LOC_Os12g37860 |
| Reference | |
|---|---|
| PubMed | 22973062 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g12430.1 |
| Rice Genome Annotation | LOC_Os08g12430.1 |
| Ricechip | LOC_Os08g12430.1 |
| KEGG | osa:4344961 dosa:Os08t0220600-01 |
| Entrez-Gene | 4344961 |