RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g12760.2 View Network Show in Genome Browser |
| Other Names | Os08g0224200 |
| Description | YT521-B, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 7559098-7563158 Nucleotide Length: 1713 |
| Protein-coding | LOC_Os08g12760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52790 LOC_Os01g43710 LOC_Os05g30890 LOC_Os03g54091 LOC_Os01g43750 LOC_Os01g43700 LOC_Os01g43774 LOC_Os01g41820 LOC_Os01g43740 LOC_Os01g43844 LOC_Os01g41810 More.. |
| Downstream Genes | LOC_Os09g10850 LOC_Os09g33970 LOC_Os09g07500 LOC_Os08g39300 LOC_Os09g23820 LOC_Os08g33300 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167e-3p osa-miR167i-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g12760.2 |
| Rice Genome Annotation | LOC_Os08g12760.2 |
| Ricechip | LOC_Os08g12760.2 |
| KEGG | osa:4344968 dosa:Os08t0224200-01 |
| Entrez-Gene | 4344968 |