RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g12840.1 View Network Show in Genome Browser |
| Other Names | Os08g0225000 |
| Description | FabA-like domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 7610695-7614807 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os08g12840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52400 LOC_Os01g54900 LOC_Os07g04200 LOC_Os02g10260 LOC_Os03g38230 LOC_Os01g63830 LOC_Os04g41300 LOC_Os02g03460 LOC_Os03g18590 LOC_Os06g07120 LOC_Os03g40180 More.. |
| Downstream Genes | LOC_Os10g30860 LOC_Os08g33440 LOC_Os12g35630 LOC_Os08g23810 LOC_Os08g25290 LOC_Os11g05570 LOC_Os08g21660 LOC_Os12g08170 LOC_Os10g36470 LOC_Os12g18880 LOC_Os10g17990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g12840.1 |
| Rice Genome Annotation | LOC_Os08g12840.1 |
| Ricechip | LOC_Os08g12840.1 |
| KEGG | osa:4344974 dosa:Os08t0225000-00 |
| Entrez-Gene | 4344974 |