RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g13440.2 View Network Show in Genome Browser |
| Other Names | Os08g0231400 |
| Description | cupin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 7994392-7995717 Nucleotide Length: 675 |
| Protein-coding | LOC_Os08g13440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g10320 LOC_Os08g10310 LOC_Os07g45570 LOC_Os04g52190 LOC_Os01g22370 LOC_Os03g19420 LOC_Os03g46454 LOC_Os05g01560 LOC_Os01g22249 |
| Downstream Genes | LOC_Os09g17344 LOC_Os09g17329 LOC_Os08g24200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g13440.2 |
| Rice Genome Annotation | LOC_Os08g13440.2 |
| Ricechip | LOC_Os08g13440.2 |
| KEGG | osa:4344999 dosa:Os08t0231400-01 |
| Entrez-Gene | 4344999 |