RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g13690.1 View Network Show in Genome Browser |
| Other Names | Os08g0234000 |
| Description | 60S ribosomal protein L7, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 8153369-8155981 Nucleotide Length: 738 |
| Protein-coding | LOC_Os08g13690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g30530 LOC_Os03g58430 LOC_Os07g08660 LOC_Os02g01560 LOC_Os01g25610 LOC_Os05g28750 LOC_Os01g19840 LOC_Os03g04750 LOC_Os03g59310 LOC_Os03g21940 LOC_Os03g38000 More.. |
| Downstream Genes | LOC_Os10g32820 LOC_Os12g38000 LOC_Os12g41400 LOC_Os12g07740 LOC_Os09g08430 LOC_Os11g38959 LOC_Os09g32976 LOC_Os08g23710 LOC_Os12g21798 LOC_Os12g03880 LOC_Os11g04070 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5144-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g13690.1 |
| Rice Genome Annotation | LOC_Os08g13690.1 |
| Ricechip | LOC_Os08g13690.1 |
| KEGG | osa:4345009 dosa:Os08t0234000-01 |
| Entrez-Gene | 4345009 |