RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g13890.1 View Network Show in Genome Browser |
| Other Names | Os08g0236700 |
| Description | exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 8297234-8299645 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os08g13890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g02060 LOC_Os02g55630 LOC_Os03g14400 LOC_Os03g18870 LOC_Os04g23180 LOC_Os03g14420 LOC_Os04g55180 LOC_Os01g48300 LOC_Os03g19220 LOC_Os04g44650 LOC_Os02g42570 More.. |
| Downstream Genes | LOC_Os08g31980 LOC_Os10g08474 LOC_Os10g08319 LOC_Os12g24580 LOC_Os09g20990 LOC_Os10g08540 LOC_Os08g32930 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g13890.1 |
| Rice Genome Annotation | LOC_Os08g13890.1 |
| Ricechip | LOC_Os08g13890.1 |
| KEGG | osa:4345016 dosa:Os08t0236700-00 |
| Entrez-Gene | 4345016 |