RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g14230.1 View Network Show in Genome Browser |
| Other Names | Os08g0240800 |
| Description | villin, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 8508449-8516435 Nucleotide Length: 1932 |
| Protein-coding | LOC_Os08g14230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73310 LOC_Os05g01600 LOC_Os03g10790 LOC_Os03g06070 LOC_Os01g66690 LOC_Os03g61970 LOC_Os02g42740 LOC_Os01g16110 LOC_Os05g01820 LOC_Os01g73990 LOC_Os02g43360 More.. |
| Downstream Genes | LOC_Os11g24560 LOC_Os11g29200 LOC_Os12g24250 LOC_Os10g37420 LOC_Os10g35870 LOC_Os08g36994 LOC_Os09g28610 LOC_Os11g06390 LOC_Os09g16920 LOC_Os10g36650 LOC_Os10g35850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g14230.1 |
| Rice Genome Annotation | LOC_Os08g14230.1 |
| Ricechip | LOC_Os08g14230.1 |
| KEGG | osa:4345036 dosa:Os08t0240800-01 |
| Entrez-Gene | 4345036 |