RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g14440.3 View Network Show in Genome Browser |
| Other Names | Os08g0242700 |
| Description | uridylyltransferase-related, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 8668896-8672887 Nucleotide Length: 582 |
| Protein-coding | LOC_Os08g14440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g07130 LOC_Os01g74650 LOC_Os01g54020 LOC_Os02g13170 LOC_Os02g52420 LOC_Os05g49380 LOC_Os02g47020 LOC_Os08g05490 LOC_Os04g52100 LOC_Os07g32590 |
| Downstream Genes | LOC_Os09g33470 LOC_Os10g36470 LOC_Os08g23110 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2094-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g14440.3 |
| Rice Genome Annotation | LOC_Os08g14440.3 |
| Ricechip | LOC_Os08g14440.3 |
| KEGG | osa:9271427 dosa:Os08t0242700-01 |
| Entrez-Gene | 9271427 |