RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os08g14450.1 View Network Show in Genome Browser
Other Names	Os08g0243001,Os08g0242800
Description	RNA polymerase sigma factor, putative, expressed
Gene Attributes	Chromosome: Chr8 CDS Coordinates (5'-3'): 8677955-8681990 Nucleotide Length: 1719
Protein-coding	LOC_Os08g14450

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g30420 LOC_Os05g47850 LOC_Os07g43370 LOC_Os03g61030 LOC_Os03g08790 LOC_Os02g09590 LOC_Os03g55310 LOC_Os01g59060
Downstream Genes	LOC_Os08g25900

Database Links
Gramene	LOC_Os08g14450.1
Rice Genome Annotation	LOC_Os08g14450.1
Ricechip	LOC_Os08g14450.1
KEGG	osa:4345044 dosa:Os08t0242800-01