RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g15040.1 View Network Show in Genome Browser |
| Other Names | Os08g0248900 |
| Description | ADP-ribosylation factor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 9081486-9086614 Nucleotide Length: 549 |
| Protein-coding | LOC_Os08g15040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63710 LOC_Os04g52460 LOC_Os03g17020 LOC_Os05g26890 LOC_Os03g27450 LOC_Os05g48240 LOC_Os03g14260 LOC_Os02g22090 LOC_Os07g42820 LOC_Os05g41060 LOC_Os01g59790 More.. |
| Downstream Genes | LOC_Os12g40190 LOC_Os11g10050 LOC_Os11g07280 LOC_Os08g41250 LOC_Os10g42420 LOC_Os12g41400 LOC_Os12g07740 LOC_Os09g34010 LOC_Os08g25624 LOC_Os12g37370 LOC_Os08g42020 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172d-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g15040.1 |
| Rice Genome Annotation | LOC_Os08g15040.1 |
| Ricechip | LOC_Os08g15040.1 |
| KEGG | osa:4345072 dosa:Os08t0248900-01 |
| Entrez-Gene | 4345072 |