RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g15170.1 View Network Show in Genome Browser |
| Other Names | Os08g0250200 |
| Description | ATP synthase epsilon chain, mitochondrial, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 9179588-9180385 Nucleotide Length: 315 |
| Protein-coding | LOC_Os08g15170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19890 LOC_Os07g31490 LOC_Os03g19510 LOC_Os04g51270 LOC_Os04g38750 LOC_Os07g49400 LOC_Os05g49200 |
| Downstream Genes | LOC_Os12g37419 LOC_Os10g43050 |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00680 rn00190 rn00195 |
| Metacyc Pathways | PWY-6126 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g15170.1 |
| Rice Genome Annotation | LOC_Os08g15170.1 |
| Ricechip | LOC_Os08g15170.1 |
| KEGG | osa:4345078 dosa:Os08t0250200-01 |
| Entrez-Gene | 4345078 |