RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g16130.1 View Network Show in Genome Browser |
| Other Names | Os08g0261100 |
| Description | fiber protein Fb34, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 9830986-9834051 Nucleotide Length: 600 |
| Protein-coding | LOC_Os08g16130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g03790 LOC_Os07g36110 LOC_Os05g02990 LOC_Os02g47450 LOC_Os06g44190 LOC_Os08g15030 LOC_Os01g55190 LOC_Os02g10190 LOC_Os07g40620 LOC_Os02g41550 LOC_Os06g35470 More.. |
| Downstream Genes | LOC_Os10g30290 LOC_Os12g02120 LOC_Os10g34370 LOC_Os09g29080 LOC_Os11g02180 LOC_Os11g05390 LOC_Os08g29780 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g16130.1 |
| Rice Genome Annotation | LOC_Os08g16130.1 |
| Ricechip | LOC_Os08g16130.1 |
| KEGG | osa:4345109 dosa:Os08t0261100-01 |
| Entrez-Gene | 4345109 |