RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g17294.2 View Network Show in Genome Browser |
| Other Names | Os08g0274700 |
| Description | PSF3 - Putative GINS complex subunit, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 10567696-10578011 Nucleotide Length: 585 |
| Protein-coding | LOC_Os08g17294 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05150 LOC_Os05g37980 LOC_Os01g14610 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os03g08280 LOC_Os05g39850 LOC_Os03g57450 LOC_Os03g26450 LOC_Os07g23200 More.. |
| Downstream Genes | LOC_Os09g06560 LOC_Os12g37400 LOC_Os12g30150 LOC_Os09g16380 LOC_Os11g07040 LOC_Os12g07230 LOC_Os12g06890 LOC_Os12g03970 LOC_Os11g04170 LOC_Os12g06870 LOC_Os10g39420 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g17294.2 |
| Rice Genome Annotation | LOC_Os08g17294.2 |
| Ricechip | LOC_Os08g17294.2 |
| KEGG | osa:4345149 dosa:Os08t0274700-01 |
| Entrez-Gene | 4345149 |