RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g17390.1 View Network Show in Genome Browser |
| Other Names | Os08g0276100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 10630309-10634375 Nucleotide Length: 1410 |
| Protein-coding | LOC_Os08g17390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43560 LOC_Os03g14040 LOC_Os03g16050 LOC_Os06g04150 LOC_Os02g51470 LOC_Os03g36750 LOC_Os01g01302 LOC_Os03g39610 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g17390.1 |
| Rice Genome Annotation | LOC_Os08g17390.1 |
| Ricechip | LOC_Os08g17390.1 |
| KEGG | osa:4345153 dosa:Os08t0276100-01 |
| Entrez-Gene | 4345153 |