RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g17600.2 View Network Show in Genome Browser |
| Other Names | Os08g0277900 |
| Description | SNARE domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 10759638-10763665 Nucleotide Length: 699 |
| Protein-coding | LOC_Os08g17600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51120 LOC_Os01g37980 LOC_Os01g12730 LOC_Os01g73230 LOC_Os04g55210 LOC_Os02g24134 LOC_Os03g20340 LOC_Os06g41590 LOC_Os01g67040 LOC_Os05g44310 LOC_Os07g07000 More.. |
| Downstream Genes | LOC_Os11g06740 LOC_Os08g18110 LOC_Os12g13590 LOC_Os09g04110 LOC_Os12g05810 LOC_Os08g44930 LOC_Os09g27960 LOC_Os08g20570 LOC_Os11g10420 LOC_Os12g01390 LOC_Os11g01380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g17600.2 |
| Rice Genome Annotation | LOC_Os08g17600.2 |
| Ricechip | LOC_Os08g17600.2 |
| KEGG | osa:4345157 dosa:Os08t0277900-01 |
| Entrez-Gene | 4345157 |