RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g17680.1 View Network Show in Genome Browser |
| Other Names | Os08g0278900 |
| Description | stromal cell-derived factor 2-like protein precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 10810311-10813333 Nucleotide Length: 654 |
| Protein-coding | LOC_Os08g17680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g06440 LOC_Os06g05740 LOC_Os02g08180 LOC_Os01g38510 LOC_Os06g39260 LOC_Os03g03450 LOC_Os02g48110 LOC_Os05g23260 LOC_Os01g58730 LOC_Os03g05520 LOC_Os05g36070 More.. |
| Downstream Genes | LOC_Os09g19734 LOC_Os09g27830 LOC_Os11g09280 LOC_Os10g38930 LOC_Os11g37920 LOC_Os12g07490 LOC_Os11g38780 LOC_Os11g07040 LOC_Os09g20090 LOC_Os10g30860 LOC_Os09g17840 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g17680.1 |
| Rice Genome Annotation | LOC_Os08g17680.1 |
| Ricechip | LOC_Os08g17680.1 |
| KEGG | osa:4345160 dosa:Os08t0278900-01 |
| Entrez-Gene | 4345160 |