RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g17870.1 View Network Show in Genome Browser |
| Other Names | Os08g0280600 |
| Description | reticulon domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 10960042-10967308 Nucleotide Length: 2085 |
| Protein-coding | LOC_Os08g17870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g39840 LOC_Os05g47690 LOC_Os05g45050 LOC_Os05g43810 LOC_Os05g32120 LOC_Os04g57420 LOC_Os04g29920 LOC_Os03g56900 LOC_Os03g38930 LOC_Os03g21840 LOC_Os05g08370 More.. |
| Downstream Genes | LOC_Os10g10990 LOC_Os09g23360 LOC_Os11g19840 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g17870.1 |
| Rice Genome Annotation | LOC_Os08g17870.1 |
| Ricechip | LOC_Os08g17870.1 |
| KEGG | osa:4345164 dosa:Os08t0280600-01 |
| Entrez-Gene | 4345164 |