RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g18110.2 View Network Show in Genome Browser |
| Other Names | Os08g0282400 |
| Description | alpha-soluble NSF attachment protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 11102723-11108276 Nucleotide Length: 714 |
| Protein-coding | LOC_Os08g18110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g44310 LOC_Os01g51120 LOC_Os01g37980 LOC_Os07g09600 LOC_Os03g58840 LOC_Os03g06960 LOC_Os02g03450 LOC_Os01g12730 LOC_Os05g46720 LOC_Os01g73230 LOC_Os04g44810 More.. |
| Downstream Genes | LOC_Os12g05810 LOC_Os12g39660 LOC_Os11g06740 LOC_Os08g44430 LOC_Os12g37360 LOC_Os08g25310 LOC_Os12g44250 LOC_Os08g38850 LOC_Os11g21990 LOC_Os10g36870 LOC_Os09g30330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g18110.2 |
| Rice Genome Annotation | LOC_Os08g18110.2 |
| Ricechip | LOC_Os08g18110.2 |
| KEGG | osa:4345167 dosa:Os08t0282400-01 |
| Entrez-Gene | 4345167 |