RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g19310.1 View Network Show in Genome Browser |
| Other Names | Os08g0290000 |
| Description | pentatricopeptide repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 11552519-11554939 Nucleotide Length: 2421 |
| Protein-coding | LOC_Os08g19310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g15080 LOC_Os05g14040 LOC_Os06g25500 LOC_Os06g25470 LOC_Os03g05220 LOC_Os07g13460 LOC_Os06g31220 LOC_Os03g13614 |
| Downstream Genes | LOC_Os12g13290 LOC_Os09g27970 LOC_Os11g48090 LOC_Os10g06700 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g19310.1 |
| Rice Genome Annotation | LOC_Os08g19310.1 |
| Ricechip | LOC_Os08g19310.1 |
| KEGG | osa:4345183 dosa:Os08t0290000-01 |
| Entrez-Gene | 4345183 |