RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g19590.1 View Network Show in Genome Browser |
| Other Names | Os08g0292000 |
| Description | Homeobox domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 11702603-11711044 Nucleotide Length: 2361 |
| Protein-coding | LOC_Os08g19590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g45370 LOC_Os06g38470 LOC_Os03g46770 LOC_Os02g45344 LOC_Os02g57220 LOC_Os02g12380 LOC_Os02g12350 LOC_Os01g34590 |
| Downstream Genes | LOC_Os12g42910 LOC_Os12g43600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g19590.1 |
| Rice Genome Annotation | LOC_Os08g19590.1 |
| Ricechip | LOC_Os08g19590.1 |
| KEGG | osa:4345188 dosa:Os08t0292000-01 |
| Entrez-Gene | 4345188 |