RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g20544.1 View Network Show in Genome Browser |
| Other Names | Os08g0300200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 12331526-12342183 Nucleotide Length: 1269 |
| Protein-coding | LOC_Os08g20544 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g42770 LOC_Os01g04260 LOC_Os05g28950 LOC_Os03g45170 LOC_Os04g55220 LOC_Os01g72940 LOC_Os02g32490 LOC_Os01g33030 LOC_Os02g25060 LOC_Os04g36890 LOC_Os02g10740 More.. |
| Downstream Genes | LOC_Os11g32240 LOC_Os11g07500 LOC_Os12g42850 LOC_Os10g30090 LOC_Os09g36770 LOC_Os10g35290 LOC_Os09g07830 LOC_Os09g34970 LOC_Os12g37560 LOC_Os11g11390 LOC_Os12g39070 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g20544.1 |
| Rice Genome Annotation | LOC_Os08g20544.1 |
| Ricechip | LOC_Os08g20544.1 |
| KEGG | osa:4345217 dosa:Os08t0300200-02 |
| Entrez-Gene | 4345217 |