RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g20570.2 View Network Show in Genome Browser |
| Other Names | Os08g0300300 |
| Description | chloride channel protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 12350726-12357011 Nucleotide Length: 2283 |
| Protein-coding | LOC_Os08g20570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g55410 LOC_Os04g32880 LOC_Os03g63940 LOC_Os05g50280 LOC_Os08g04280 LOC_Os03g47120 LOC_Os01g16260 LOC_Os01g17214 LOC_Os05g49270 LOC_Os05g49260 LOC_Os08g17600 More.. |
| Downstream Genes | LOC_Os12g03860 LOC_Os11g05390 LOC_Os11g04030 LOC_Os11g04020 LOC_Os11g04104 LOC_Os12g03899 LOC_Os12g03830 LOC_Os12g03870 LOC_Os11g04060 LOC_Os11g04150 LOC_Os11g42430 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g20570.2 |
| Rice Genome Annotation | LOC_Os08g20570.2 |
| Ricechip | LOC_Os08g20570.2 |
| KEGG | osa:4345218 dosa:Os08t0300300-01 |
| Entrez-Gene | 4345218 |