RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g20660.1 View Network Show in Genome Browser |
| Other Names | Os08g0301500 |
| Description | sucrose-phosphate synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 12411932-12424769 Nucleotide Length: 3201 |
| Protein-coding | LOC_Os08g20660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g01030 LOC_Os04g49960 LOC_Os04g34000 LOC_Os03g11560 LOC_Os03g08300 LOC_Os01g46430 LOC_Os01g43380 LOC_Os06g06560 LOC_Os07g16960 LOC_Os03g55720 LOC_Os07g37240 More.. |
| Downstream Genes | LOC_Os12g39340 LOC_Os09g12530 LOC_Os10g30156 LOC_Os11g41610 LOC_Os11g12810 LOC_Os09g30340 LOC_Os08g39300 LOC_Os12g05430 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | SUCSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g20660.1 |
| Rice Genome Annotation | LOC_Os08g20660.1 |
| Ricechip | LOC_Os08g20660.1 |
| KEGG | osa:4345220 dosa:Os08t0301500-01 |
| Entrez-Gene | 4345220 |