RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g21330.1 View Network Show in Genome Browser |
| Other Names | Os08g0304900 |
| Description | formamidopyrimidine-DNA glycosylase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 12710873-12719471 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os08g21330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g07709 LOC_Os03g58050 LOC_Os03g49710 LOC_Os01g74520 LOC_Os03g46640 LOC_Os08g07850 LOC_Os04g54500 LOC_Os08g07840 LOC_Os02g56200 LOC_Os07g12530 LOC_Os05g01110 More.. |
| Downstream Genes | LOC_Os09g10770 LOC_Os12g19370 LOC_Os09g33460 LOC_Os08g29530 LOC_Os11g11000 LOC_Os08g37444 LOC_Os09g35000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g21330.1 |
| Rice Genome Annotation | LOC_Os08g21330.1 |
| Ricechip | LOC_Os08g21330.1 |
| KEGG | osa:4345225 dosa:Os08t0304900-01 |
| Entrez-Gene | 4345225 |