RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os08g21590.2 View Network Show in Genome Browser
Other Names	Os08g0307400
Description	phosphatidylinositol 3-kinase, root isoform, putative, expressed
Gene Attributes	Chromosome: Chr8 CDS Coordinates (5'-3'): 12854448-12871422 Nucleotide Length: 2484
Protein-coding	LOC_Os08g21590

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g55340 LOC_Os03g57070 LOC_Os03g44200 LOC_Os03g17800 LOC_Os07g45064 LOC_Os06g23290 LOC_Os04g57300 LOC_Os02g18840 LOC_Os06g17290 LOC_Os05g51230 LOC_Os01g13360 More..
Downstream Genes	LOC_Os11g10420 LOC_Os09g29890 LOC_Os08g38200 LOC_Os09g03310 LOC_Os08g44260 LOC_Os11g20384 LOC_Os09g22500 LOC_Os11g42000 LOC_Os09g07830 LOC_Os08g34950 LOC_Os10g14180 More..

miRNA Regulations
miRNAs	osa-miR1442

Database Links
Gramene	LOC_Os08g21590.2
Rice Genome Annotation	LOC_Os08g21590.2
Ricechip	LOC_Os08g21590.2
KEGG	osa:4345232 dosa:Os08t0307400-02
Entrez-Gene	4345232