RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g21660.1 View Network Show in Genome Browser |
| Other Names | Os08g0308100 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 12906720-12913661 Nucleotide Length: 981 |
| Protein-coding | LOC_Os08g21660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54700 LOC_Os01g03070 LOC_Os07g03230 LOC_Os06g48350 LOC_Os02g54690 LOC_Os01g58220 LOC_Os05g41900 LOC_Os03g18570 LOC_Os08g13690 LOC_Os03g18580 LOC_Os05g51500 More.. |
| Downstream Genes | LOC_Os10g41960 LOC_Os09g15770 LOC_Os12g07740 LOC_Os12g05430 LOC_Os12g41400 LOC_Os11g11390 LOC_Os08g44450 LOC_Os09g32976 LOC_Os08g23710 LOC_Os08g44480 LOC_Os08g44380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g21660.1 |
| Rice Genome Annotation | LOC_Os08g21660.1 |
| Ricechip | LOC_Os08g21660.1 |
| KEGG | osa:4345234 dosa:Os08t0308100-01 |
| Entrez-Gene | 4345234 |