RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g21760.1 View Network Show in Genome Browser |
| Other Names | Os08g0309300 |
| Description | Rer1 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 13028055-13034215 Nucleotide Length: 651 |
| Protein-coding | LOC_Os08g21760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g11850 LOC_Os01g23620 LOC_Os01g44130 LOC_Os03g60700 LOC_Os05g23600 LOC_Os06g37080 LOC_Os06g12090 LOC_Os03g28960 LOC_Os06g36990 LOC_Os07g10690 LOC_Os03g63300 More.. |
| Downstream Genes | LOC_Os12g37360 LOC_Os09g20090 LOC_Os10g37630 LOC_Os11g09280 LOC_Os09g34040 LOC_Os09g32952 LOC_Os10g34680 LOC_Os12g43363 LOC_Os08g29150 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1847.1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g21760.1 |
| Rice Genome Annotation | LOC_Os08g21760.1 |
| Ricechip | LOC_Os08g21760.1 |
| KEGG | osa:4345237 dosa:Os08t0309300-01 |
| Entrez-Gene | 4345237 |