RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g21840.1 View Network Show in Genome Browser |
| Other Names | Os08g0310100 |
| Description | 50S ribosomal protein L15, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 13072637-13076061 Nucleotide Length: 888 |
| Protein-coding | LOC_Os08g21840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03360 LOC_Os03g54040 LOC_Os03g24020 LOC_Os08g15460 LOC_Os01g10820 LOC_Os05g38580 LOC_Os01g62210 LOC_Os03g59310 LOC_Os03g29460 LOC_Os03g61260 LOC_Os05g33020 More.. |
| Downstream Genes | LOC_Os09g19954 LOC_Os09g17840 LOC_Os09g17830 LOC_Os09g07910 LOC_Os12g42180 LOC_Os12g04160 LOC_Os11g04370 LOC_Os11g37510 LOC_Os12g30490 LOC_Os10g41050 LOC_Os08g27090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g21840.1 |
| Rice Genome Annotation | LOC_Os08g21840.1 |
| Ricechip | LOC_Os08g21840.1 |
| KEGG | osa:4345238 dosa:Os08t0310100-01 |
| Entrez-Gene | 4345238 |