RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g23180.1 View Network Show in Genome Browser |
| Other Names | Os08g0321000 |
| Description | fasciclin-like arabinogalactan protein 8 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 13985040-13988220 Nucleotide Length: 1248 |
| Protein-coding | LOC_Os08g23180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g08080 LOC_Os04g42620 LOC_Os03g50030 LOC_Os07g43990 LOC_Os01g59150 LOC_Os03g57460 LOC_Os08g06380 LOC_Os07g38490 LOC_Os03g48180 LOC_Os03g44560 LOC_Os05g20930 More.. |
| Downstream Genes | LOC_Os09g07350 LOC_Os12g13160 LOC_Os09g35630 LOC_Os08g38270 LOC_Os10g02040 LOC_Os10g19880 LOC_Os10g22590 LOC_Os12g34524 LOC_Os11g30560 LOC_Os11g02350 LOC_Os12g38360 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g23180.1 |
| Rice Genome Annotation | LOC_Os08g23180.1 |
| Ricechip | LOC_Os08g23180.1 |
| KEGG | osa:4345261 dosa:Os08t0321000-01 |
| Entrez-Gene | 4345261 |