RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g23430.2 View Network Show in Genome Browser |
| Other Names | Os08g0323600 |
| Description | starch binding domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 14167710-14178849 Nucleotide Length: 2838 |
| Protein-coding | LOC_Os08g23430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g30840 LOC_Os07g46790 LOC_Os03g22950 LOC_Os07g12150 LOC_Os05g31290 LOC_Os03g63930 LOC_Os03g18590 LOC_Os03g19510 LOC_Os07g46600 LOC_Os04g36800 LOC_Os02g30060 More.. |
| Downstream Genes | LOC_Os09g01620 LOC_Os08g40860 LOC_Os08g43580 LOC_Os11g31900 LOC_Os09g36860 LOC_Os12g34890 LOC_Os10g36860 LOC_Os12g37380 LOC_Os11g34850 LOC_Os11g34770 LOC_Os12g13930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g23430.2 |
| Rice Genome Annotation | LOC_Os08g23430.2 |
| Ricechip | LOC_Os08g23430.2 |
| KEGG | osa:4345271 dosa:Os08t0323600-02 |
| Entrez-Gene | 4345271 |