RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g23440.1 View Network Show in Genome Browser |
| Other Names | Os08g0323800,Os08g0323700 |
| Description | amino acid permease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 14186144-14195420 Nucleotide Length: 2970 |
| Protein-coding | LOC_Os08g23440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g37984 LOC_Os06g46310 LOC_Os01g11160 LOC_Os06g34830 LOC_Os01g42234 LOC_Os02g43860 LOC_Os03g45170 LOC_Os06g05180 LOC_Os01g69210 LOC_Os02g47210 LOC_Os06g18830 More.. |
| Downstream Genes | LOC_Os11g07280 LOC_Os11g05690 LOC_Os12g41890 LOC_Os12g07670 LOC_Os12g06060 LOC_Os10g30090 LOC_Os12g42850 LOC_Os09g30150 LOC_Os08g38320 LOC_Os09g08420 LOC_Os08g41370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g23440.1 |
| Rice Genome Annotation | LOC_Os08g23440.1 |
| Ricechip | LOC_Os08g23440.1 |
| KEGG | osa:4345273 osa:4345272 dosa:Os08t0323800-01dosa:Os08t0323700-01 |
| Entrez-Gene | 4345273 |