RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g23730.1 View Network Show in Genome Browser |
| Other Names | Os08g0326600 |
| Description | class I glutamine amidotransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 14356969-14361049 Nucleotide Length: 1635 |
| Protein-coding | LOC_Os08g23730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g25440 LOC_Os03g56800 LOC_Os04g53770 LOC_Os07g10350 LOC_Os07g30150 LOC_Os01g56620 LOC_Os03g56390 LOC_Os01g43020 LOC_Os03g19960 LOC_Os03g22880 LOC_Os06g43690 More.. |
| Downstream Genes | LOC_Os12g07300 LOC_Os09g18320 LOC_Os12g36950 LOC_Os10g10434 LOC_Os09g32976 LOC_Os12g39860 LOC_Os11g34350 LOC_Os11g37080 LOC_Os12g40130 LOC_Os09g08430 LOC_Os10g42320 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 rn00983 |
| Metacyc Pathways | DENOVOPURINE2-PWY PWY-841 PWY-5043 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g23730.1 |
| Rice Genome Annotation | LOC_Os08g23730.1 |
| Ricechip | LOC_Os08g23730.1 |
| KEGG | osa:4345281 dosa:Os08t0326600-01 |
| Entrez-Gene | 4345281 |